diff --git a/modules/ml-pipeline/.pre-commit-config.yaml b/modules/ml-pipeline/.pre-commit-config.yaml index 55ad383..79ed459 100644 --- a/modules/ml-pipeline/.pre-commit-config.yaml +++ b/modules/ml-pipeline/.pre-commit-config.yaml @@ -1,5 +1,11 @@ # Pre commit hooks repos: +# - repo: local +# hooks: +# - id: build-sphinx-docs +# name: Build Sphinx Documentation +# entry: bash -c 'cd modules/ml-pipeline/docs && make html' +# language: system - repo: https://github.com/pre-commit/pre-commit-hooks rev: v2.3.0 hooks: @@ -14,6 +20,6 @@ repos: hooks: - id: dvc-push-experiment name: DVC - Push to experiment to remote location (experiments) - entry: bash -c 'cd modules/ml-pipeline/src/pipeline/src && dvc push' + entry: bash -c 'cd modules/ml-pipeline/src/pipeline/src && dvc push -r experiments || echo "Up to date!"' language: system verbose: true diff --git a/modules/ml-pipeline/docs/Makefile b/modules/ml-pipeline/docs/Makefile new file mode 100644 index 0000000..d4bb2cb --- /dev/null +++ b/modules/ml-pipeline/docs/Makefile @@ -0,0 +1,20 @@ +# Minimal makefile for Sphinx documentation +# + +# You can set these variables from the command line, and also +# from the environment for the first two. +SPHINXOPTS ?= +SPHINXBUILD ?= sphinx-build +SOURCEDIR = . +BUILDDIR = _build + +# Put it first so that "make" without argument is like "make help". +help: + @$(SPHINXBUILD) -M help "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) + +.PHONY: help Makefile + +# Catch-all target: route all unknown targets to Sphinx using the new +# "make mode" option. $(O) is meant as a shortcut for $(SPHINXOPTS). +%: Makefile + @$(SPHINXBUILD) -M $@ "$(SOURCEDIR)" "$(BUILDDIR)" $(SPHINXOPTS) $(O) diff --git a/modules/ml-pipeline/docs/README.md b/modules/ml-pipeline/docs/README.md deleted file mode 100644 index cde8373..0000000 --- a/modules/ml-pipeline/docs/README.md +++ /dev/null @@ -1,4 +0,0 @@ -# Docs generation - -This will be done via a sphinx pre-commit hook -Only file to adjust is probably the conf.py file if needed diff --git a/modules/ml-pipeline/docs/_build/doctrees/environment.pickle b/modules/ml-pipeline/docs/_build/doctrees/environment.pickle new file mode 100644 index 0000000..78bd6e1 Binary files /dev/null and b/modules/ml-pipeline/docs/_build/doctrees/environment.pickle differ diff --git a/modules/ml-pipeline/docs/_build/doctrees/index.doctree b/modules/ml-pipeline/docs/_build/doctrees/index.doctree new file mode 100644 index 0000000..f4a9eb6 Binary files /dev/null and b/modules/ml-pipeline/docs/_build/doctrees/index.doctree differ diff --git a/modules/ml-pipeline/docs/_build/doctrees/modules.doctree b/modules/ml-pipeline/docs/_build/doctrees/modules.doctree new file mode 100644 index 0000000..4a22a44 Binary files /dev/null and b/modules/ml-pipeline/docs/_build/doctrees/modules.doctree differ diff --git a/modules/ml-pipeline/docs/_build/doctrees/src.core.doctree b/modules/ml-pipeline/docs/_build/doctrees/src.core.doctree new file mode 100644 index 0000000..6292384 Binary files /dev/null and b/modules/ml-pipeline/docs/_build/doctrees/src.core.doctree differ diff --git a/modules/ml-pipeline/docs/_build/doctrees/src.core.interface.doctree b/modules/ml-pipeline/docs/_build/doctrees/src.core.interface.doctree new file mode 100644 index 0000000..a2002dc Binary files /dev/null and b/modules/ml-pipeline/docs/_build/doctrees/src.core.interface.doctree differ diff --git a/modules/ml-pipeline/docs/_build/doctrees/src.doctree b/modules/ml-pipeline/docs/_build/doctrees/src.doctree new file mode 100644 index 0000000..ccc072e Binary files /dev/null and b/modules/ml-pipeline/docs/_build/doctrees/src.doctree differ diff --git a/modules/ml-pipeline/docs/_build/html/.buildinfo b/modules/ml-pipeline/docs/_build/html/.buildinfo new file mode 100644 index 0000000..2410301 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/.buildinfo @@ -0,0 +1,4 @@ +# Sphinx build info version 1 +# This file hashes the configuration used when building these files. When it is not found, a full rebuild will be done. +config: 3f3ff68ecd6e013aca173ae96ddcdaf6 +tags: 645f666f9bcd5a90fca523b33c5a78b7 diff --git a/modules/ml-pipeline/docs/_build/html/_modules/index.html b/modules/ml-pipeline/docs/_build/html/_modules/index.html new file mode 100644 index 0000000..17621a0 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_modules/index.html @@ -0,0 +1,101 @@ + + + + + + Overview: module code — ML-Pipelines documentation + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+
    +
    • +
  • Overview: module code
    • +
  • +
    • +
+
+
+
+
+ +

All modules for which code is available

+ + +
+
+ +
+
+
+
+ + + + diff --git a/modules/ml-pipeline/docs/_build/html/_modules/src/core/Logger.html b/modules/ml-pipeline/docs/_build/html/_modules/src/core/Logger.html new file mode 100644 index 0000000..ee17e87 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_modules/src/core/Logger.html @@ -0,0 +1,132 @@ + + + + + + src.core.Logger — ML-Pipelines documentation + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +

Source code for src.core.Logger

+"""
+Logger that will be used throughout the application
+"""
+
+import logging
+
+
+

+[docs]
+def setup_logger():
+    # Create a logger
+    logger = logging.getLogger()
+
+    # Set the log level
+    logger.setLevel(logging.INFO)
+
+    # Create a formatter
+    formatter = logging.Formatter("%(asctime)s - %(levelname)s - %(message)s")
+
+    # Create a stream handler to direct logs to stdout
+    stream_handler = logging.StreamHandler()
+    stream_handler.setFormatter(formatter)
+
+    # Add the stream handler to the logger
+    logger.addHandler(stream_handler)
+
+    return logger

+
+
+
+logger = setup_logger()
+
+ +
+
+ +
+
+
+
+ + + + diff --git a/modules/ml-pipeline/docs/_build/html/_sources/index.rst.txt b/modules/ml-pipeline/docs/_build/html/_sources/index.rst.txt new file mode 100644 index 0000000..79b8cb9 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_sources/index.rst.txt @@ -0,0 +1,20 @@ +.. ML Pipeline documentation master file, created by + sphinx-quickstart on Sun Sep 10 15:39:29 2023. + You can adapt this file completely to your liking, but it should at least + contain the root `toctree` directive. + +Welcome to ML Pipeline's documentation! +======================================= + +.. toctree:: + :maxdepth: 2 + :caption: Contents: + + modules + +Indices and tables +================== + +* :ref:`genindex` +* :ref:`modindex` +* :ref:`search` diff --git a/modules/ml-pipeline/docs/_build/html/_sources/modules.rst.txt b/modules/ml-pipeline/docs/_build/html/_sources/modules.rst.txt new file mode 100644 index 0000000..e9ff8ac --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_sources/modules.rst.txt @@ -0,0 +1,7 @@ +src +=== + +.. toctree:: + :maxdepth: 4 + + src diff --git a/modules/ml-pipeline/docs/_build/html/_sources/src.core.interface.rst.txt b/modules/ml-pipeline/docs/_build/html/_sources/src.core.interface.rst.txt new file mode 100644 index 0000000..23ba27f --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_sources/src.core.interface.rst.txt @@ -0,0 +1,37 @@ +src.core.interface package +========================== + +Submodules +---------- + +src.core.interface.InterfaceDataClient module +--------------------------------------------- + +.. automodule:: src.core.interface.InterfaceDataClient + :members: + :undoc-members: + :show-inheritance: + +src.core.interface.InterfaceMetrics module +------------------------------------------ + +.. automodule:: src.core.interface.InterfaceMetrics + :members: + :undoc-members: + :show-inheritance: + +src.core.interface.InterfaceModels module +----------------------------------------- + +.. automodule:: src.core.interface.InterfaceModels + :members: + :undoc-members: + :show-inheritance: + +Module contents +--------------- + +.. automodule:: src.core.interface + :members: + :undoc-members: + :show-inheritance: diff --git a/modules/ml-pipeline/docs/_build/html/_sources/src.core.rst.txt b/modules/ml-pipeline/docs/_build/html/_sources/src.core.rst.txt new file mode 100644 index 0000000..6829606 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_sources/src.core.rst.txt @@ -0,0 +1,53 @@ +src.core package +================ + +Subpackages +----------- + +.. toctree:: + :maxdepth: 4 + + src.core.interface + +Submodules +---------- + +src.core.DataClient module +-------------------------- + +.. automodule:: src.core.DataClient + :members: + :undoc-members: + :show-inheritance: + +src.core.Logger module +---------------------- + +.. automodule:: src.core.Logger + :members: + :undoc-members: + :show-inheritance: + +src.core.MLMetrics module +------------------------- + +.. automodule:: src.core.MLMetrics + :members: + :undoc-members: + :show-inheritance: + +src.core.MLModels module +------------------------ + +.. automodule:: src.core.MLModels + :members: + :undoc-members: + :show-inheritance: + +Module contents +--------------- + +.. automodule:: src.core + :members: + :undoc-members: + :show-inheritance: diff --git a/modules/ml-pipeline/docs/_build/html/_sources/src.rst.txt b/modules/ml-pipeline/docs/_build/html/_sources/src.rst.txt new file mode 100644 index 0000000..2d6f83f --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_sources/src.rst.txt @@ -0,0 +1,53 @@ +src package +=========== + +Subpackages +----------- + +.. toctree:: + :maxdepth: 4 + + src.core + +Submodules +---------- + +src.build\_model module +----------------------- + +.. automodule:: src.build_model + :members: + :undoc-members: + :show-inheritance: + +src.generate\_metrics module +---------------------------- + +.. automodule:: src.generate_metrics + :members: + :undoc-members: + :show-inheritance: + +src.generate\_predictions module +-------------------------------- + +.. automodule:: src.generate_predictions + :members: + :undoc-members: + :show-inheritance: + +src.prepare\_data module +------------------------ + +.. automodule:: src.prepare_data + :members: + :undoc-members: + :show-inheritance: + +Module contents +--------------- + +.. automodule:: src + :members: + :undoc-members: + :show-inheritance: diff --git a/modules/ml-pipeline/docs/_build/html/_static/_sphinx_javascript_frameworks_compat.js b/modules/ml-pipeline/docs/_build/html/_static/_sphinx_javascript_frameworks_compat.js new file mode 100644 index 0000000..8141580 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_static/_sphinx_javascript_frameworks_compat.js @@ -0,0 +1,123 @@ +/* Compatability shim for jQuery and underscores.js. + * + * Copyright Sphinx contributors + * Released under the two clause BSD licence + */ + +/** + * small helper function to urldecode strings + * + * See https://developer.mozilla.org/en-US/docs/Web/JavaScript/Reference/Global_Objects/decodeURIComponent#Decoding_query_parameters_from_a_URL + */ +jQuery.urldecode = function(x) { + if (!x) { + return x + } + return decodeURIComponent(x.replace(/\+/g, ' ')); +}; + +/** + * small helper function to urlencode strings + */ +jQuery.urlencode = encodeURIComponent; + +/** + * This function returns the parsed url parameters of the + * current request. 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span; + var isInSVG = jQuery(node).closest("body, svg, foreignObject").is("svg"); + if (isInSVG) { + span = document.createElementNS("http://www.w3.org/2000/svg", "tspan"); + } else { + span = document.createElement("span"); + span.className = className; + } + span.appendChild(document.createTextNode(val.substr(pos, text.length))); + node.parentNode.insertBefore(span, node.parentNode.insertBefore( + document.createTextNode(val.substr(pos + text.length)), + node.nextSibling)); + node.nodeValue = val.substr(0, pos); + if (isInSVG) { + var rect = document.createElementNS("http://www.w3.org/2000/svg", "rect"); + var bbox = node.parentElement.getBBox(); + rect.x.baseVal.value = bbox.x; + rect.y.baseVal.value = bbox.y; + rect.width.baseVal.value = bbox.width; + rect.height.baseVal.value = bbox.height; + rect.setAttribute('class', className); + addItems.push({ + "parent": node.parentNode, + "target": rect}); + } + } + } + else if (!jQuery(node).is("button, select, textarea")) { + jQuery.each(node.childNodes, function() { + highlight(this, addItems); + }); + } + } + var addItems = []; + var result = this.each(function() { + highlight(this, addItems); + }); + for (var i = 0; i < addItems.length; ++i) { + jQuery(addItems[i].parent).before(addItems[i].target); + } + return result; +}; + +/* + * backward compatibility for jQuery.browser + * This will be supported until firefox bug is fixed. + */ +if (!jQuery.browser) { + jQuery.uaMatch = function(ua) { + ua = ua.toLowerCase(); + + var match = /(chrome)[ \/]([\w.]+)/.exec(ua) || + /(webkit)[ \/]([\w.]+)/.exec(ua) || + /(opera)(?:.*version|)[ \/]([\w.]+)/.exec(ua) || + /(msie) ([\w.]+)/.exec(ua) || + ua.indexOf("compatible") < 0 && /(mozilla)(?:.*? rv:([\w.]+)|)/.exec(ua) || + []; + + return { + browser: match[ 1 ] || "", + version: match[ 2 ] || "0" + }; + }; + jQuery.browser = {}; + jQuery.browser[jQuery.uaMatch(navigator.userAgent).browser] = true; +} diff --git a/modules/ml-pipeline/docs/_build/html/_static/basic.css b/modules/ml-pipeline/docs/_build/html/_static/basic.css new file mode 100644 index 0000000..16e1d1e --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_static/basic.css @@ -0,0 +1,925 @@ +/* + * basic.css + * ~~~~~~~~~ + * + * Sphinx stylesheet -- basic theme. + * + * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS. + * :license: BSD, see LICENSE for details. + * + */ + +/* -- main layout ----------------------------------------------------------- */ + +div.clearer { + clear: both; +} + +div.section::after { + display: block; + content: ''; + clear: left; +} + +/* -- relbar ---------------------------------------------------------------- */ + +div.related { + width: 100%; + font-size: 90%; +} + +div.related h3 { + display: none; +} + +div.related ul { + margin: 0; + padding: 0 0 0 10px; + list-style: none; +} + +div.related li { + display: inline; +} + +div.related li.right { + float: right; + margin-right: 5px; +} + +/* -- sidebar --------------------------------------------------------------- */ + +div.sphinxsidebarwrapper { + padding: 10px 5px 0 10px; +} + +div.sphinxsidebar { + float: left; + width: 230px; + margin-left: -100%; + font-size: 90%; + word-wrap: break-word; + overflow-wrap : break-word; +} + +div.sphinxsidebar ul { + list-style: none; +} + +div.sphinxsidebar ul ul, +div.sphinxsidebar ul.want-points { + margin-left: 20px; + list-style: square; +} + +div.sphinxsidebar ul ul { + margin-top: 0; + margin-bottom: 0; +} + +div.sphinxsidebar form { + margin-top: 10px; +} + +div.sphinxsidebar input { + border: 1px solid #98dbcc; + font-family: sans-serif; + font-size: 1em; +} + +div.sphinxsidebar #searchbox form.search { + overflow: hidden; +} + +div.sphinxsidebar #searchbox input[type="text"] { + float: left; + width: 80%; + padding: 0.25em; + box-sizing: border-box; +} + +div.sphinxsidebar #searchbox input[type="submit"] { + float: left; + width: 20%; + border-left: none; + padding: 0.25em; + box-sizing: border-box; +} + + +img { + border: 0; + max-width: 100%; +} + +/* -- search page ----------------------------------------------------------- */ + +ul.search { + margin: 10px 0 0 20px; + padding: 0; +} + +ul.search li { + padding: 5px 0 5px 20px; + background-image: url(file.png); + background-repeat: no-repeat; + background-position: 0 7px; +} + +ul.search li a { + font-weight: bold; +} + +ul.search li p.context { + color: #888; + margin: 2px 0 0 30px; + text-align: left; +} + +ul.keywordmatches li.goodmatch a { + font-weight: bold; +} + +/* -- index page ------------------------------------------------------------ */ + +table.contentstable { + width: 90%; + margin-left: auto; + margin-right: auto; +} + +table.contentstable p.biglink { + line-height: 150%; +} + +a.biglink { + font-size: 1.3em; +} + +span.linkdescr { + font-style: italic; + padding-top: 5px; + font-size: 90%; +} + +/* -- general index --------------------------------------------------------- */ + +table.indextable { + width: 100%; +} + +table.indextable td { + text-align: left; + vertical-align: top; +} + +table.indextable ul { + margin-top: 0; + margin-bottom: 0; + list-style-type: none; +} + +table.indextable > tbody > tr > td > ul { + padding-left: 0em; +} + +table.indextable tr.pcap { + height: 10px; +} + +table.indextable tr.cap { + margin-top: 10px; + background-color: #f2f2f2; +} + +img.toggler { + margin-right: 3px; + margin-top: 3px; + cursor: pointer; +} + +div.modindex-jumpbox { + border-top: 1px solid #ddd; + border-bottom: 1px solid #ddd; + margin: 1em 0 1em 0; + padding: 0.4em; +} + +div.genindex-jumpbox { + border-top: 1px solid #ddd; + border-bottom: 1px solid #ddd; + margin: 1em 0 1em 0; + padding: 0.4em; +} + +/* -- domain module index --------------------------------------------------- */ + +table.modindextable td { + padding: 2px; + border-collapse: collapse; +} + +/* -- general body styles --------------------------------------------------- */ + +div.body { + min-width: 360px; + max-width: 800px; +} + +div.body p, div.body dd, div.body li, div.body blockquote { + -moz-hyphens: auto; + -ms-hyphens: auto; + -webkit-hyphens: auto; + hyphens: auto; +} + +a.headerlink { + visibility: hidden; +} + +a:visited { + color: #551A8B; +} + +h1:hover > a.headerlink, +h2:hover > a.headerlink, +h3:hover > a.headerlink, +h4:hover > a.headerlink, +h5:hover > a.headerlink, +h6:hover > a.headerlink, +dt:hover > a.headerlink, +caption:hover > a.headerlink, +p.caption:hover > a.headerlink, +div.code-block-caption:hover > a.headerlink { + visibility: visible; +} + +div.body p.caption { + text-align: inherit; +} + +div.body td { + text-align: left; +} + +.first { + margin-top: 0 !important; +} + +p.rubric { + margin-top: 30px; + font-weight: bold; +} + +img.align-left, figure.align-left, .figure.align-left, object.align-left { + clear: left; + float: left; + margin-right: 1em; +} + +img.align-right, figure.align-right, .figure.align-right, object.align-right { + clear: right; + float: right; + margin-left: 1em; +} + +img.align-center, figure.align-center, .figure.align-center, object.align-center { + display: block; + margin-left: auto; + margin-right: auto; +} + +img.align-default, figure.align-default, .figure.align-default { + display: block; + margin-left: auto; + margin-right: auto; +} + +.align-left { + text-align: left; +} + +.align-center { + text-align: center; +} + +.align-default { + text-align: center; +} + +.align-right { + text-align: right; +} + +/* -- sidebars -------------------------------------------------------------- */ + +div.sidebar, +aside.sidebar { + margin: 0 0 0.5em 1em; + border: 1px solid #ddb; + padding: 7px; + background-color: #ffe; + width: 40%; + float: right; + clear: right; + overflow-x: auto; +} + +p.sidebar-title { + font-weight: bold; +} + +nav.contents, +aside.topic, +div.admonition, div.topic, blockquote { + clear: left; +} + +/* -- topics ---------------------------------------------------------------- */ + +nav.contents, +aside.topic, +div.topic { + border: 1px solid #ccc; + padding: 7px; + margin: 10px 0 10px 0; +} + +p.topic-title { + font-size: 1.1em; + font-weight: bold; + margin-top: 10px; +} + +/* -- admonitions ----------------------------------------------------------- */ + +div.admonition { + margin-top: 10px; + margin-bottom: 10px; + padding: 7px; +} + +div.admonition dt { + font-weight: bold; +} + +p.admonition-title { + margin: 0px 10px 5px 0px; + font-weight: bold; +} + +div.body p.centered { + text-align: center; + margin-top: 25px; +} + +/* -- content of sidebars/topics/admonitions -------------------------------- */ + +div.sidebar > :last-child, +aside.sidebar > :last-child, +nav.contents > :last-child, +aside.topic > :last-child, +div.topic > :last-child, +div.admonition > :last-child { + margin-bottom: 0; +} + +div.sidebar::after, +aside.sidebar::after, +nav.contents::after, +aside.topic::after, +div.topic::after, +div.admonition::after, +blockquote::after { + display: block; + content: ''; + clear: both; +} + +/* -- tables ---------------------------------------------------------------- */ + +table.docutils { + margin-top: 10px; + margin-bottom: 10px; + border: 0; + border-collapse: collapse; +} + +table.align-center { + margin-left: auto; + margin-right: auto; +} + +table.align-default { + margin-left: auto; + margin-right: auto; +} + +table caption span.caption-number { + font-style: italic; +} + +table caption span.caption-text { +} + +table.docutils td, table.docutils th { + padding: 1px 8px 1px 5px; + border-top: 0; + border-left: 0; + border-right: 0; + border-bottom: 1px solid #aaa; +} + +th { + text-align: left; + padding-right: 5px; +} + +table.citation { + border-left: solid 1px gray; + margin-left: 1px; +} + +table.citation td { + border-bottom: none; +} + +th > :first-child, +td > :first-child { + margin-top: 0px; +} + +th > :last-child, +td > 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font-weight: bold } /* Name.Namespace */ +.highlight .nt { color: #008000; font-weight: bold } /* Name.Tag */ +.highlight .nv { color: #19177C } /* Name.Variable */ +.highlight .ow { color: #AA22FF; font-weight: bold } /* Operator.Word */ +.highlight .w { color: #bbbbbb } /* Text.Whitespace */ +.highlight .mb { color: #666666 } /* Literal.Number.Bin */ +.highlight .mf { color: #666666 } /* Literal.Number.Float */ +.highlight .mh { color: #666666 } /* Literal.Number.Hex */ +.highlight .mi { color: #666666 } /* Literal.Number.Integer */ +.highlight .mo { color: #666666 } /* Literal.Number.Oct */ +.highlight .sa { color: #BA2121 } /* Literal.String.Affix */ +.highlight .sb { color: #BA2121 } /* Literal.String.Backtick */ +.highlight .sc { color: #BA2121 } /* Literal.String.Char */ +.highlight .dl { color: #BA2121 } /* Literal.String.Delimiter */ +.highlight .sd { color: #BA2121; font-style: italic } /* Literal.String.Doc */ +.highlight .s2 { color: #BA2121 } /* Literal.String.Double */ +.highlight .se { color: #AA5D1F; font-weight: bold } /* Literal.String.Escape */ +.highlight .sh { color: #BA2121 } /* Literal.String.Heredoc */ +.highlight .si { color: #A45A77; font-weight: bold } /* Literal.String.Interpol */ +.highlight .sx { color: #008000 } /* Literal.String.Other */ +.highlight .sr { color: #A45A77 } /* Literal.String.Regex */ +.highlight .s1 { color: #BA2121 } /* Literal.String.Single */ +.highlight .ss { color: #19177C } /* Literal.String.Symbol */ +.highlight .bp { color: #008000 } /* Name.Builtin.Pseudo */ +.highlight .fm { color: #0000FF } /* Name.Function.Magic */ +.highlight .vc { color: #19177C } /* Name.Variable.Class */ +.highlight .vg { color: #19177C } /* Name.Variable.Global */ +.highlight .vi { color: #19177C } /* Name.Variable.Instance */ +.highlight .vm { color: #19177C } /* Name.Variable.Magic */ +.highlight .il { color: #666666 } /* Literal.Number.Integer.Long */ diff --git a/modules/ml-pipeline/docs/_build/html/_static/searchtools.js b/modules/ml-pipeline/docs/_build/html/_static/searchtools.js new file mode 100644 index 0000000..7918c3f --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_static/searchtools.js @@ -0,0 +1,574 @@ +/* + * searchtools.js + * ~~~~~~~~~~~~~~~~ + * + * Sphinx JavaScript utilities for the full-text search. + * + * :copyright: Copyright 2007-2023 by the Sphinx team, see AUTHORS. + * :license: BSD, see LICENSE for details. + * + */ +"use strict"; + +/** + * Simple result scoring code. + */ +if (typeof Scorer === "undefined") { + var Scorer = { + // Implement the following function to further tweak the score for each result + // The function takes a result array [docname, title, anchor, descr, score, filename] + // and returns the new score. + /* + score: result => { + const [docname, title, anchor, descr, score, filename] = result + return score + }, + */ + + // query matches the full name of an object + objNameMatch: 11, + // or matches in the last dotted part of the object name + objPartialMatch: 6, + // Additive scores depending on the priority of the object + objPrio: { + 0: 15, // used to be importantResults + 1: 5, // used to be objectResults + 2: -5, // used to be unimportantResults + }, + // Used when the priority is not in the mapping. + objPrioDefault: 0, + + // query found in title + title: 15, + partialTitle: 7, + // query found in terms + term: 5, + partialTerm: 2, + }; +} + +const _removeChildren = (element) => { + while (element && element.lastChild) element.removeChild(element.lastChild); +}; + +/** + * See https://developer.mozilla.org/en-US/docs/Web/JavaScript/Guide/Regular_Expressions#escaping + */ +const _escapeRegExp = (string) => + string.replace(/[.*+\-?^${}()|[\]\\]/g, "\\$&"); // $& means the whole matched string + +const _displayItem = (item, searchTerms, highlightTerms) => { + const docBuilder = DOCUMENTATION_OPTIONS.BUILDER; + const docFileSuffix = DOCUMENTATION_OPTIONS.FILE_SUFFIX; + const docLinkSuffix = DOCUMENTATION_OPTIONS.LINK_SUFFIX; + const showSearchSummary = DOCUMENTATION_OPTIONS.SHOW_SEARCH_SUMMARY; + const contentRoot = document.documentElement.dataset.content_root; + + const [docName, title, anchor, descr, score, _filename] = item; + + let listItem = document.createElement("li"); + let requestUrl; + let linkUrl; + if (docBuilder === "dirhtml") { + // dirhtml builder + let dirname = docName + "/"; + if (dirname.match(/\/index\/$/)) + dirname = dirname.substring(0, dirname.length - 6); + else if (dirname === "index/") dirname = ""; + requestUrl = contentRoot + dirname; + linkUrl = requestUrl; + } else { + // normal html builders + requestUrl = contentRoot + docName + docFileSuffix; + linkUrl = docName + docLinkSuffix; + } + let linkEl = listItem.appendChild(document.createElement("a")); + linkEl.href = linkUrl + anchor; + linkEl.dataset.score = score; + linkEl.innerHTML = title; + if (descr) { + listItem.appendChild(document.createElement("span")).innerHTML = + " (" + descr + ")"; + // highlight search terms in the description + if (SPHINX_HIGHLIGHT_ENABLED) // set in sphinx_highlight.js + highlightTerms.forEach((term) => _highlightText(listItem, term, "highlighted")); + } + else if (showSearchSummary) + fetch(requestUrl) + .then((responseData) => responseData.text()) + .then((data) => { + if (data) + listItem.appendChild( + Search.makeSearchSummary(data, searchTerms) + ); + // highlight search terms in the summary + if (SPHINX_HIGHLIGHT_ENABLED) // set in sphinx_highlight.js + highlightTerms.forEach((term) => _highlightText(listItem, term, "highlighted")); + }); + Search.output.appendChild(listItem); +}; +const _finishSearch = (resultCount) => { + Search.stopPulse(); + Search.title.innerText = _("Search Results"); + if (!resultCount) + Search.status.innerText = Documentation.gettext( + "Your search did not match any documents. Please make sure that all words are spelled correctly and that you've selected enough categories." + ); + else + Search.status.innerText = _( + `Search finished, found ${resultCount} page(s) matching the search query.` + ); +}; +const _displayNextItem = ( + results, + resultCount, + searchTerms, + highlightTerms, +) => { + // results left, load the summary and display it + // this is intended to be dynamic (don't sub resultsCount) + if (results.length) { + _displayItem(results.pop(), searchTerms, highlightTerms); + setTimeout( + () => _displayNextItem(results, resultCount, searchTerms, highlightTerms), + 5 + ); + } + // search finished, update title and status message + else _finishSearch(resultCount); +}; + +/** + * Default splitQuery function. Can be overridden in ``sphinx.search`` with a + * custom function per language. + * + * The regular expression works by splitting the string on consecutive characters + * that are not Unicode letters, numbers, underscores, or emoji characters. + * This is the same as ``\W+`` in Python, preserving the surrogate pair area. + */ +if (typeof splitQuery === "undefined") { + var splitQuery = (query) => query + .split(/[^\p{Letter}\p{Number}_\p{Emoji_Presentation}]+/gu) + .filter(term => term) // remove remaining empty strings +} + +/** + * Search Module + */ +const Search = { + _index: null, + _queued_query: null, + _pulse_status: -1, + + htmlToText: (htmlString) => { + const htmlElement = new DOMParser().parseFromString(htmlString, 'text/html'); + htmlElement.querySelectorAll(".headerlink").forEach((el) => { el.remove() }); + const docContent = htmlElement.querySelector('[role="main"]'); + if (docContent !== undefined) return docContent.textContent; + console.warn( + "Content block not found. Sphinx search tries to obtain it via '[role=main]'. Could you check your theme or template." + ); + return ""; + }, + + init: () => { + const query = new URLSearchParams(window.location.search).get("q"); + document + .querySelectorAll('input[name="q"]') + .forEach((el) => (el.value = query)); + if (query) Search.performSearch(query); + }, + + loadIndex: (url) => + (document.body.appendChild(document.createElement("script")).src = url), + + setIndex: (index) => { + Search._index = index; + if (Search._queued_query !== null) { + const query = Search._queued_query; + Search._queued_query = null; + Search.query(query); + } + }, + + hasIndex: () => Search._index !== null, + + deferQuery: (query) => (Search._queued_query = query), + + stopPulse: () => (Search._pulse_status = -1), + + startPulse: () => { + if (Search._pulse_status >= 0) return; + + const pulse = () => { + Search._pulse_status = (Search._pulse_status + 1) % 4; + Search.dots.innerText = ".".repeat(Search._pulse_status); + if (Search._pulse_status >= 0) window.setTimeout(pulse, 500); + }; + pulse(); + }, + + /** + * perform a search for something (or wait until index is loaded) + */ + performSearch: (query) => { + // create the required interface elements + const searchText = document.createElement("h2"); + searchText.textContent = _("Searching"); + const searchSummary = document.createElement("p"); + searchSummary.classList.add("search-summary"); + searchSummary.innerText = ""; + const searchList = document.createElement("ul"); + searchList.classList.add("search"); + + const out = document.getElementById("search-results"); + Search.title = out.appendChild(searchText); + Search.dots = Search.title.appendChild(document.createElement("span")); + Search.status = out.appendChild(searchSummary); + Search.output = out.appendChild(searchList); + + const searchProgress = document.getElementById("search-progress"); + // Some themes don't use the search progress node + if (searchProgress) { + searchProgress.innerText = _("Preparing search..."); + } + Search.startPulse(); + + // index already loaded, the browser was quick! + if (Search.hasIndex()) Search.query(query); + else Search.deferQuery(query); + }, + + /** + * execute search (requires search index to be loaded) + */ + query: (query) => { + const filenames = Search._index.filenames; + const docNames = Search._index.docnames; + const titles = Search._index.titles; + const allTitles = Search._index.alltitles; + const indexEntries = Search._index.indexentries; + + // stem the search terms and add them to the correct list + const stemmer = new Stemmer(); + const searchTerms = new Set(); + const excludedTerms = new Set(); + const highlightTerms = new Set(); + const objectTerms = new Set(splitQuery(query.toLowerCase().trim())); + splitQuery(query.trim()).forEach((queryTerm) => { + const queryTermLower = queryTerm.toLowerCase(); + + // maybe skip this "word" + // stopwords array is from language_data.js + if ( + stopwords.indexOf(queryTermLower) !== -1 || + queryTerm.match(/^\d+$/) + ) + return; + + // stem the word + let word = stemmer.stemWord(queryTermLower); + // select the correct list + if (word[0] === "-") excludedTerms.add(word.substr(1)); + else { + searchTerms.add(word); + highlightTerms.add(queryTermLower); + } + }); + + if (SPHINX_HIGHLIGHT_ENABLED) { // set in sphinx_highlight.js + localStorage.setItem("sphinx_highlight_terms", [...highlightTerms].join(" ")) + } + + // console.debug("SEARCH: searching for:"); + // console.info("required: ", [...searchTerms]); + // console.info("excluded: ", [...excludedTerms]); + + // array of [docname, title, anchor, descr, score, filename] + let results = []; + _removeChildren(document.getElementById("search-progress")); + + const queryLower = query.toLowerCase(); + for (const [title, foundTitles] of Object.entries(allTitles)) { + if (title.toLowerCase().includes(queryLower) && (queryLower.length >= title.length/2)) { + for (const [file, id] of foundTitles) { + let score = Math.round(100 * queryLower.length / title.length) + results.push([ + docNames[file], + titles[file] !== title ? `${titles[file]} > ${title}` : title, + id !== null ? "#" + id : "", + null, + score, + filenames[file], + ]); + } + } + } + + // search for explicit entries in index directives + for (const [entry, foundEntries] of Object.entries(indexEntries)) { + if (entry.includes(queryLower) && (queryLower.length >= entry.length/2)) { + for (const [file, id] of foundEntries) { + let score = Math.round(100 * queryLower.length / entry.length) + results.push([ + docNames[file], + titles[file], + id ? "#" + id : "", + null, + score, + filenames[file], + ]); + } + } + } + + // lookup as object + objectTerms.forEach((term) => + results.push(...Search.performObjectSearch(term, objectTerms)) + ); + + // lookup as search terms in fulltext + results.push(...Search.performTermsSearch(searchTerms, excludedTerms)); + + // let the scorer override scores with a custom scoring function + if (Scorer.score) results.forEach((item) => (item[4] = Scorer.score(item))); + + // now sort the results by score (in opposite order of appearance, since the + // display function below uses pop() to retrieve items) and then + // alphabetically + results.sort((a, b) => { + const leftScore = a[4]; + const rightScore = b[4]; + if (leftScore === rightScore) { + // same score: sort alphabetically + const leftTitle = a[1].toLowerCase(); + const rightTitle = b[1].toLowerCase(); + if (leftTitle === rightTitle) return 0; + return leftTitle > rightTitle ? -1 : 1; // inverted is intentional + } + return leftScore > rightScore ? 1 : -1; + }); + + // remove duplicate search results + // note the reversing of results, so that in the case of duplicates, the highest-scoring entry is kept + let seen = new Set(); + results = results.reverse().reduce((acc, result) => { + let resultStr = result.slice(0, 4).concat([result[5]]).map(v => String(v)).join(','); + if (!seen.has(resultStr)) { + acc.push(result); + seen.add(resultStr); + } + return acc; + }, []); + + results = results.reverse(); + + // for debugging + //Search.lastresults = results.slice(); // a copy + // console.info("search results:", Search.lastresults); + + // print the results + _displayNextItem(results, results.length, searchTerms, highlightTerms); + }, + + /** + * search for object names + */ + performObjectSearch: (object, objectTerms) => { + const filenames = Search._index.filenames; + const docNames = Search._index.docnames; + const objects = Search._index.objects; + const objNames = Search._index.objnames; + const titles = Search._index.titles; + + const results = []; + + const objectSearchCallback = (prefix, match) => { + const name = match[4] + const fullname = (prefix ? prefix + "." : "") + name; + const fullnameLower = fullname.toLowerCase(); + if (fullnameLower.indexOf(object) < 0) return; + + let score = 0; + const parts = fullnameLower.split("."); + + // check for different match types: exact matches of full name or + // "last name" (i.e. last dotted part) + if (fullnameLower === object || parts.slice(-1)[0] === object) + score += Scorer.objNameMatch; + else if (parts.slice(-1)[0].indexOf(object) > -1) + score += Scorer.objPartialMatch; // matches in last name + + const objName = objNames[match[1]][2]; + const title = titles[match[0]]; + + // If more than one term searched for, we require other words to be + // found in the name/title/description + const otherTerms = new Set(objectTerms); + otherTerms.delete(object); + if (otherTerms.size > 0) { + const haystack = `${prefix} ${name} ${objName} ${title}`.toLowerCase(); + if ( + [...otherTerms].some((otherTerm) => haystack.indexOf(otherTerm) < 0) + ) + return; + } + + let anchor = match[3]; + if (anchor === "") anchor = fullname; + else if (anchor === "-") anchor = objNames[match[1]][1] + "-" + fullname; + + const descr = objName + _(", in ") + title; + + // add custom score for some objects according to scorer + if (Scorer.objPrio.hasOwnProperty(match[2])) + score += Scorer.objPrio[match[2]]; + else score += Scorer.objPrioDefault; + + results.push([ + docNames[match[0]], + fullname, + "#" + anchor, + descr, + score, + filenames[match[0]], + ]); + }; + Object.keys(objects).forEach((prefix) => + objects[prefix].forEach((array) => + objectSearchCallback(prefix, array) + ) + ); + return results; + }, + + /** + * search for full-text terms in the index + */ + performTermsSearch: (searchTerms, excludedTerms) => { + // prepare search + const terms = Search._index.terms; + const titleTerms = Search._index.titleterms; + const filenames = Search._index.filenames; + const docNames = Search._index.docnames; + const titles = Search._index.titles; + + const scoreMap = new Map(); + const fileMap = new Map(); + + // perform the search on the required terms + searchTerms.forEach((word) => { + const files = []; + const arr = [ + { files: terms[word], score: Scorer.term }, + { files: titleTerms[word], score: Scorer.title }, + ]; + // add support for partial matches + if (word.length > 2) { + const escapedWord = _escapeRegExp(word); + Object.keys(terms).forEach((term) => { + if (term.match(escapedWord) && !terms[word]) + arr.push({ files: terms[term], score: Scorer.partialTerm }); + }); + Object.keys(titleTerms).forEach((term) => { + if (term.match(escapedWord) && !titleTerms[word]) + arr.push({ files: titleTerms[word], score: Scorer.partialTitle }); + }); + } + + // no match but word was a required one + if (arr.every((record) => record.files === undefined)) return; + + // found search word in contents + arr.forEach((record) => { + if (record.files === undefined) return; + + let recordFiles = record.files; + if (recordFiles.length === undefined) recordFiles = [recordFiles]; + files.push(...recordFiles); + + // set score for the word in each file + recordFiles.forEach((file) => { + if (!scoreMap.has(file)) scoreMap.set(file, {}); + scoreMap.get(file)[word] = record.score; + }); + }); + + // create the mapping + files.forEach((file) => { + if (fileMap.has(file) && fileMap.get(file).indexOf(word) === -1) + fileMap.get(file).push(word); + else fileMap.set(file, [word]); + }); + }); + + // now check if the files don't contain excluded terms + const results = []; + for (const [file, wordList] of fileMap) { + // check if all requirements are matched + + // as search terms with length < 3 are discarded + const filteredTermCount = [...searchTerms].filter( + (term) => term.length > 2 + ).length; + if ( + wordList.length !== searchTerms.size && + wordList.length !== filteredTermCount + ) + continue; + + // ensure that none of the excluded terms is in the search result + if ( + [...excludedTerms].some( + (term) => + terms[term] === file || + titleTerms[term] === file || + (terms[term] || []).includes(file) || + (titleTerms[term] || []).includes(file) + ) + ) + break; + + // select one (max) score for the file. + const score = Math.max(...wordList.map((w) => scoreMap.get(file)[w])); + // add result to the result list + results.push([ + docNames[file], + titles[file], + "", + null, + score, + filenames[file], + ]); + } + return results; + }, + + /** + * helper function to return a node containing the + * search summary for a given text. keywords is a list + * of stemmed words. + */ + makeSearchSummary: (htmlText, keywords) => { + const text = Search.htmlToText(htmlText); + if (text === "") return null; + + const textLower = text.toLowerCase(); + const actualStartPosition = [...keywords] + .map((k) => textLower.indexOf(k.toLowerCase())) + .filter((i) => i > -1) + .slice(-1)[0]; + const startWithContext = Math.max(actualStartPosition - 120, 0); + + const top = startWithContext === 0 ? "" : "..."; + const tail = startWithContext + 240 < text.length ? "..." : ""; + + let summary = document.createElement("p"); + summary.classList.add("context"); + summary.textContent = top + text.substr(startWithContext, 240).trim() + tail; + + return summary; + }, +}; + +_ready(Search.init); diff --git a/modules/ml-pipeline/docs/_build/html/_static/sphinx_highlight.js b/modules/ml-pipeline/docs/_build/html/_static/sphinx_highlight.js new file mode 100644 index 0000000..8a96c69 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/_static/sphinx_highlight.js @@ -0,0 +1,154 @@ +/* Highlighting utilities for Sphinx HTML documentation. */ +"use strict"; + +const SPHINX_HIGHLIGHT_ENABLED = true + +/** + * highlight a given string on a node by wrapping it in + * span elements with the given class name. + */ +const _highlight = (node, addItems, text, className) => { + if (node.nodeType === Node.TEXT_NODE) { + const val = node.nodeValue; + const parent = node.parentNode; + const pos = val.toLowerCase().indexOf(text); + if ( + pos >= 0 && + !parent.classList.contains(className) && + !parent.classList.contains("nohighlight") + ) { + let span; + + const closestNode = parent.closest("body, svg, foreignObject"); + const isInSVG = closestNode && closestNode.matches("svg"); + if (isInSVG) { + span = document.createElementNS("http://www.w3.org/2000/svg", "tspan"); + } else { + span = document.createElement("span"); + span.classList.add(className); + } + + span.appendChild(document.createTextNode(val.substr(pos, text.length))); + const rest = document.createTextNode(val.substr(pos + text.length)); + parent.insertBefore( + span, + parent.insertBefore( + rest, + node.nextSibling + ) + ); + node.nodeValue = val.substr(0, pos); + /* There may be more occurrences of search term in this node. So call this + * function recursively on the remaining fragment. + */ + _highlight(rest, addItems, text, className); + + if (isInSVG) { + const rect = document.createElementNS( + "http://www.w3.org/2000/svg", + "rect" + ); + const bbox = parent.getBBox(); + rect.x.baseVal.value = bbox.x; + rect.y.baseVal.value = bbox.y; + rect.width.baseVal.value = bbox.width; + rect.height.baseVal.value = bbox.height; + rect.setAttribute("class", className); + addItems.push({ parent: parent, target: rect }); + } + } + } else if (node.matches && !node.matches("button, select, textarea")) { + node.childNodes.forEach((el) => _highlight(el, addItems, text, className)); + } +}; +const _highlightText = (thisNode, text, className) => { + let addItems = []; + _highlight(thisNode, addItems, text, className); + addItems.forEach((obj) => + obj.parent.insertAdjacentElement("beforebegin", obj.target) + ); +}; + +/** + * Small JavaScript module for the documentation. + */ +const SphinxHighlight = { + + /** + * highlight the search words provided in localstorage in the text + */ + highlightSearchWords: () => { + if (!SPHINX_HIGHLIGHT_ENABLED) return; // bail if no highlight + + // get and clear terms from localstorage + const url = new URL(window.location); + const highlight = + localStorage.getItem("sphinx_highlight_terms") + || url.searchParams.get("highlight") + || ""; + localStorage.removeItem("sphinx_highlight_terms") + url.searchParams.delete("highlight"); + window.history.replaceState({}, "", url); + + // get individual terms from highlight string + const terms = highlight.toLowerCase().split(/\s+/).filter(x => x); + if (terms.length === 0) return; // nothing to do + + // There should never be more than one element matching "div.body" + const divBody = document.querySelectorAll("div.body"); + const body = divBody.length ? divBody[0] : document.querySelector("body"); + window.setTimeout(() => { + terms.forEach((term) => _highlightText(body, term, "highlighted")); + }, 10); + + const searchBox = document.getElementById("searchbox"); + if (searchBox === null) return; + searchBox.appendChild( + document + .createRange() + .createContextualFragment( + '

' + + '' + + _("Hide Search Matches") + + "

" + ) + ); + }, + + /** + * helper function to hide the search marks again + */ + hideSearchWords: () => { + document + .querySelectorAll("#searchbox .highlight-link") + .forEach((el) => el.remove()); + document + .querySelectorAll("span.highlighted") + .forEach((el) => el.classList.remove("highlighted")); + localStorage.removeItem("sphinx_highlight_terms") + }, + + initEscapeListener: () => { + // only install a listener if it is really needed + if (!DOCUMENTATION_OPTIONS.ENABLE_SEARCH_SHORTCUTS) return; + + document.addEventListener("keydown", (event) => { + // bail for input elements + if (BLACKLISTED_KEY_CONTROL_ELEMENTS.has(document.activeElement.tagName)) return; + // bail with special keys + if (event.shiftKey || event.altKey || event.ctrlKey || event.metaKey) return; + if (DOCUMENTATION_OPTIONS.ENABLE_SEARCH_SHORTCUTS && (event.key === "Escape")) { + SphinxHighlight.hideSearchWords(); + event.preventDefault(); + } + }); + }, +}; + +_ready(() => { + /* Do not call highlightSearchWords() when we are on the search page. + * It will highlight words from the *previous* search query. + */ + if (typeof Search === "undefined") SphinxHighlight.highlightSearchWords(); + SphinxHighlight.initEscapeListener(); +}); diff --git a/modules/ml-pipeline/docs/_build/html/genindex.html b/modules/ml-pipeline/docs/_build/html/genindex.html new file mode 100644 index 0000000..0910426 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/genindex.html @@ -0,0 +1,164 @@ + + + + + + Index — ML-Pipelines documentation + + + + + + + + + + + + + + + +
+ + +
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Index

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  • + src.core.interface + +
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+
+ + + + diff --git a/modules/ml-pipeline/docs/_build/html/index.html b/modules/ml-pipeline/docs/_build/html/index.html new file mode 100644 index 0000000..3d7ab9b --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/index.html @@ -0,0 +1,124 @@ + + + + + + + Welcome to ML Pipeline’s documentation! — ML-Pipelines documentation + + + + + + + + + + + + + + + + +
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Welcome to ML Pipeline’s documentation!

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Contents:

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Indices and tables

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Python Module Index

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+ s
+ src +
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+ + + + diff --git a/modules/ml-pipeline/docs/_build/html/search.html b/modules/ml-pipeline/docs/_build/html/search.html new file mode 100644 index 0000000..c70b8ff --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/search.html @@ -0,0 +1,120 @@ + + + + + + Search — ML-Pipelines documentation + + + + + + + + + + + + + + + + + + +
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+ + +
+ +
+
+
+ +
+
+
+
+ +
+

src.core package

+
+

Subpackages

+
+ +
+
+
+

Submodules

+
+
+

src.core.DataClient module

+
+
+

src.core.Logger module

+

Logger that will be used throughout the application

+
+
+src.core.Logger.setup_logger()[source]
+
+ +
+
+

src.core.MLMetrics module

+
+
+

src.core.MLModels module

+
+
+

Module contents

+
+
+ + +
+
+ +
+
+
+
+ + + + diff --git a/modules/ml-pipeline/docs/_build/html/src.core.interface.html b/modules/ml-pipeline/docs/_build/html/src.core.interface.html new file mode 100644 index 0000000..81bd630 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/src.core.interface.html @@ -0,0 +1,140 @@ + + + + + + + src.core.interface package — ML-Pipelines documentation + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

src.core.interface package

+
+

Submodules

+
+
+

src.core.interface.InterfaceDataClient module

+
+
+

src.core.interface.InterfaceMetrics module

+
+
+

src.core.interface.InterfaceModels module

+
+
+

Module contents

+
+
+ + +
+
+ +
+
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+
+ + + + diff --git a/modules/ml-pipeline/docs/_build/html/src.html b/modules/ml-pipeline/docs/_build/html/src.html new file mode 100644 index 0000000..6ca7b80 --- /dev/null +++ b/modules/ml-pipeline/docs/_build/html/src.html @@ -0,0 +1,173 @@ + + + + + + + src package — ML-Pipelines documentation + + + + + + + + + + + + + + + + + +
+ + +
+ +
+
+
+ +
+
+
+
+ +
+

src package

+
+

Subpackages

+
+ +
+
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+

Submodules

+
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+

src.build_model module

+
+
+

src.generate_metrics module

+
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+

src.generate_predictions module

+
+
+

src.prepare_data module

+
+
+

Module contents

+
+
+ + +
+
+ +
+
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+
+ + + + diff --git a/modules/ml-pipeline/docs/conf.py b/modules/ml-pipeline/docs/conf.py new file mode 100644 index 0000000..b3f51da --- /dev/null +++ b/modules/ml-pipeline/docs/conf.py @@ -0,0 +1,37 @@ +# Configuration file for the Sphinx documentation builder. +# +# For the full list of built-in configuration values, see the documentation: +# https://www.sphinx-doc.org/en/master/usage/configuration.html + +# -- Project information ----------------------------------------------------- +# https://www.sphinx-doc.org/en/master/usage/configuration.html#project-information + +project = "ML-Pipelines" +copyright = "2023, MD" +author = "MD" + +import os +import sys + +sys.path.insert(0, os.path.abspath("../src/pipeline/")) +sys.path.insert(0, os.path.abspath("../src/pipeline/src")) + +# -- General configuration --------------------------------------------------- +# https://www.sphinx-doc.org/en/master/usage/configuration.html#general-configuration + +extensions = [ + "sphinx.ext.autodoc", + "sphinx.ext.coverage", + "sphinx.ext.viewcode", + "sphinx.ext.napoleon", +] + +templates_path = ["_templates"] +exclude_patterns = ["_build", "Thumbs.db", ".DS_Store"] + + +# -- Options for HTML output ------------------------------------------------- +# https://www.sphinx-doc.org/en/master/usage/configuration.html#options-for-html-output + +html_theme = "sphinx_rtd_theme" +html_static_path = ["_static"] diff --git a/modules/ml-pipeline/docs/index.rst b/modules/ml-pipeline/docs/index.rst new file mode 100644 index 0000000..79b8cb9 --- /dev/null +++ b/modules/ml-pipeline/docs/index.rst @@ -0,0 +1,20 @@ +.. ML Pipeline documentation master file, created by + sphinx-quickstart on Sun Sep 10 15:39:29 2023. + You can adapt this file completely to your liking, but it should at least + contain the root `toctree` directive. + +Welcome to ML Pipeline's documentation! +======================================= + +.. toctree:: + :maxdepth: 2 + :caption: Contents: + + modules + +Indices and tables +================== + +* :ref:`genindex` +* :ref:`modindex` +* :ref:`search` diff --git a/modules/ml-pipeline/docs/make.bat b/modules/ml-pipeline/docs/make.bat new file mode 100644 index 0000000..32bb245 --- /dev/null +++ b/modules/ml-pipeline/docs/make.bat @@ -0,0 +1,35 @@ +@ECHO OFF + +pushd %~dp0 + +REM Command file for Sphinx documentation + +if "%SPHINXBUILD%" == "" ( + set SPHINXBUILD=sphinx-build +) +set SOURCEDIR=. +set BUILDDIR=_build + +%SPHINXBUILD% >NUL 2>NUL +if errorlevel 9009 ( + echo. + echo.The 'sphinx-build' command was not found. Make sure you have Sphinx + echo.installed, then set the SPHINXBUILD environment variable to point + echo.to the full path of the 'sphinx-build' executable. Alternatively you + echo.may add the Sphinx directory to PATH. + echo. + echo.If you don't have Sphinx installed, grab it from + echo.https://www.sphinx-doc.org/ + exit /b 1 +) + +if "%1" == "" goto help + +%SPHINXBUILD% -M %1 %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O% +goto end + +:help +%SPHINXBUILD% -M help %SOURCEDIR% %BUILDDIR% %SPHINXOPTS% %O% + +:end +popd diff --git a/modules/ml-pipeline/docs/modules.rst b/modules/ml-pipeline/docs/modules.rst new file mode 100644 index 0000000..e9ff8ac --- /dev/null +++ b/modules/ml-pipeline/docs/modules.rst @@ -0,0 +1,7 @@ +src +=== + +.. toctree:: + :maxdepth: 4 + + src diff --git a/modules/ml-pipeline/docs/src.core.interface.rst b/modules/ml-pipeline/docs/src.core.interface.rst new file mode 100644 index 0000000..23ba27f --- /dev/null +++ b/modules/ml-pipeline/docs/src.core.interface.rst @@ -0,0 +1,37 @@ +src.core.interface package +========================== + +Submodules +---------- + +src.core.interface.InterfaceDataClient module +--------------------------------------------- + +.. automodule:: src.core.interface.InterfaceDataClient + :members: + :undoc-members: + :show-inheritance: + +src.core.interface.InterfaceMetrics module +------------------------------------------ + +.. automodule:: src.core.interface.InterfaceMetrics + :members: + :undoc-members: + :show-inheritance: + +src.core.interface.InterfaceModels module +----------------------------------------- + +.. automodule:: src.core.interface.InterfaceModels + :members: + :undoc-members: + :show-inheritance: + +Module contents +--------------- + +.. automodule:: src.core.interface + :members: + :undoc-members: + :show-inheritance: diff --git a/modules/ml-pipeline/docs/src.core.rst b/modules/ml-pipeline/docs/src.core.rst new file mode 100644 index 0000000..6829606 --- /dev/null +++ b/modules/ml-pipeline/docs/src.core.rst @@ -0,0 +1,53 @@ +src.core package +================ + +Subpackages +----------- + +.. toctree:: + :maxdepth: 4 + + src.core.interface + +Submodules +---------- + +src.core.DataClient module +-------------------------- + +.. automodule:: src.core.DataClient + :members: + :undoc-members: + :show-inheritance: + +src.core.Logger module +---------------------- + +.. automodule:: src.core.Logger + :members: + :undoc-members: + :show-inheritance: + +src.core.MLMetrics module +------------------------- + +.. automodule:: src.core.MLMetrics + :members: + :undoc-members: + :show-inheritance: + +src.core.MLModels module +------------------------ + +.. automodule:: src.core.MLModels + :members: + :undoc-members: + :show-inheritance: + +Module contents +--------------- + +.. automodule:: src.core + :members: + :undoc-members: + :show-inheritance: diff --git a/modules/ml-pipeline/docs/src.rst b/modules/ml-pipeline/docs/src.rst new file mode 100644 index 0000000..2d6f83f --- /dev/null +++ b/modules/ml-pipeline/docs/src.rst @@ -0,0 +1,53 @@ +src package +=========== + +Subpackages +----------- + +.. toctree:: + :maxdepth: 4 + + src.core + +Submodules +---------- + +src.build\_model module +----------------------- + +.. automodule:: src.build_model + :members: + :undoc-members: + :show-inheritance: + +src.generate\_metrics module +---------------------------- + +.. automodule:: src.generate_metrics + :members: + :undoc-members: + :show-inheritance: + +src.generate\_predictions module +-------------------------------- + +.. automodule:: src.generate_predictions + :members: + :undoc-members: + :show-inheritance: + +src.prepare\_data module +------------------------ + +.. automodule:: src.prepare_data + :members: + :undoc-members: + :show-inheritance: + +Module contents +--------------- + +.. automodule:: src + :members: + :undoc-members: + :show-inheritance: diff --git a/modules/ml-pipeline/src/pipeline/src/generate_metrics.py b/modules/ml-pipeline/src/pipeline/src/generate_metrics.py index 3066e8a..2167671 100644 --- a/modules/ml-pipeline/src/pipeline/src/generate_metrics.py +++ b/modules/ml-pipeline/src/pipeline/src/generate_metrics.py @@ -59,7 +59,7 @@ def generate_metrics( logger.info("---------------------------") # TODO: replace with client loader here - predictions = pd.read_parquet(predictions_output_filepath) + predictions = pd.Series(pd.read_parquet(predictions_output_filepath)) logger.info("--------------------------") logger.info("--- Generating metrics ---")